ctcRbase

Entry Detail

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General Information

Database ID: BRCA00403 Cancer Type: breast cancer Dataset: GSE41245 CTCs/CTM Isolation Method: CTC-Chip

Gene Information

ncRNA Symbol: LMO3 Full Name: LIM domain only 3 Category: mRNA Synonyms: RBTN3|RBTNL2|RHOM3|Rhom-3 Chromosome: chr12 Strand: - Coordinate: Start Site(bp): 16548373 End Site(bp): 16610594 Gene Summary: The protein encoded by this gene belongs to the rhombotin family of cysteine-rich LIM domain oncogenes. This gene is predominantly expressed in the brain. Related family members, LMO1 and LMO2 on chromosome 11, have been reported to be involved in chromosomal translocations in T-cell leukemia. Many alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Aug 2011] External Links: Ensembl ID: ENSG00000048540 HGNC ID: HGNC:6643 Entrez Gene: 55885

Expression Profile of LMO3 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-101-3p YES NO YES hsa-miR-141-3p YES YES YES hsa-miR-142-3p YES YES YES hsa-miR-144-3p YES NO YES hsa-miR-181a-5p YES YES YES hsa-miR-181b-5p YES YES YES hsa-miR-181c-5p YES YES YES hsa-miR-181d-5p YES YES YES hsa-miR-185-5p YES YES NO hsa-miR-186-5p YES YES YES hsa-miR-194-5p YES YES NO hsa-miR-199a-3p YES NO YES hsa-miR-199b-3p YES NO YES hsa-miR-19a-3p YES YES NO hsa-miR-19b-3p YES YES NO hsa-miR-200a-3p YES YES YES hsa-miR-218-5p YES YES YES hsa-miR-219a-5p YES NO YES hsa-miR-300 YES YES YES hsa-miR-323a-3p YES NO YES hsa-miR-381-3p YES YES YES hsa-miR-410-3p YES YES NO hsa-miR-520f-3p YES NO YES hsa-miR-543 YES YES YES Display: