ctcRbase

Entry Detail

---



General Information

Database ID: BRCA00809 Cancer Type: breast cancer Dataset: GSE55807 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: HSP90B1 Full Name: heat shock protein 90 beta family member 1 Category: mRNA Synonyms: ECGP|GP96|GRP94|HEL-S-125m|HEL35|TRA1 Chromosome: chr12 Strand: + Coordinate: Start Site(bp): 103930107 End Site(bp): 103953645 Gene Summary: This gene encodes a member of a family of adenosine triphosphate(ATP)-metabolizing molecular chaperones with roles in stabilizing and folding other proteins. The encoded protein is localized to melanosomes and the endoplasmic reticulum. Expression of this protein is associated with a variety of pathogenic states, including tumor formation. There is a microRNA gene located within the 5' exon of this gene. There are pseudogenes for this gene on chromosomes 1 and 15. [provided by RefSeq, Aug 2012] External Links: Ensembl ID: ENSG00000166598 HGNC ID: HGNC:12028 Entrez Gene: 7184

Expression Profile of HSP90B1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1-3p YES YES YES hsa-miR-148a-3p YES YES YES hsa-miR-148b-3p YES YES YES hsa-miR-150-5p YES YES YES hsa-miR-152-3p YES YES YES hsa-miR-181a-5p YES YES YES hsa-miR-181b-5p YES YES YES hsa-miR-181c-5p YES YES YES hsa-miR-181d-5p YES YES YES hsa-miR-206 YES YES YES hsa-miR-223-3p YES YES YES hsa-miR-23a-3p YES YES YES hsa-miR-23b-3p YES YES YES hsa-miR-425-5p YES YES NO hsa-miR-433-3p YES YES YES hsa-miR-532-3p YES NO YES hsa-miR-582-5p YES NO YES hsa-miR-613 YES YES YES Display: