ctcRbase

Entry Detail

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General Information

Database ID: BRCA00950 Cancer Type: breast cancer Dataset: GSE55807 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: HMGN1 Full Name: high mobility group nucleosome binding domain 1 Category: mRNA Synonyms: HMG14 Chromosome: chr21 Strand: - Coordinate: Start Site(bp): 39342315 End Site(bp): 39349647 Gene Summary: The protein encoded by this gene binds nucleosomal DNA and is associated with transcriptionally active chromatin. Along with a similar protein, HMG17, the encoded protein may help maintain an open chromatin configuration around transcribable genes. [provided by RefSeq, Aug 2011] External Links: Ensembl ID: ENSG00000205581 HGNC ID: HGNC:4984 Entrez Gene: 3150

Expression Profile of HMGN1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1297 YES YES NO hsa-miR-136-5p YES YES NO hsa-miR-1-3p YES YES YES hsa-miR-140-5p YES YES NO hsa-miR-199a-5p YES YES NO hsa-miR-199b-5p YES YES NO hsa-miR-206 YES YES YES hsa-miR-26a-5p YES YES NO hsa-miR-26b-5p YES YES NO hsa-miR-301a-3p YES YES NO hsa-miR-301b-3p YES YES NO hsa-miR-326 YES YES NO hsa-miR-330-5p YES YES NO hsa-miR-338-3p YES YES NO hsa-miR-33a-5p YES YES YES hsa-miR-33b-5p YES YES YES hsa-miR-421 YES YES NO hsa-miR-454-3p YES YES NO hsa-miR-495-3p YES YES NO hsa-miR-613 YES YES YES Display: