ctcRbase

Entry Detail

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General Information

Database ID: BRCA01089 Cancer Type: breast cancer Dataset: GSE55807 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: BANF1 Full Name: barrier to autointegration factor 1 Category: mRNA Synonyms: BAF|BCRP1|D14S1460|NGPS Chromosome: chr11 Strand: + Coordinate: Start Site(bp): 66002079 End Site(bp): 66004149 Gene Summary: The protein encoded by this gene was first identified by its ability to protect retroviruses from intramolecular integration and therefore promote intermolecular integration into the host cell genome. The protein forms a homodimer which localizes to both the nucleus and cytoplasm and is specifically associated with chromosomes during mitosis. This protein binds to double stranded DNA in a non-specific manner and also binds to LEM-domain containing proteins of the nuclear envelope. This protein is thought to facilitate nuclear reassembly by binding with both DNA and inner nuclear membrane proteins and thereby recruit chromatin to the nuclear periphery. Alternative splicing results in multiple transcript variants encoding the same protein.[provided by RefSeq, Jan 2009] External Links: Ensembl ID: ENSG00000175334 HGNC ID: HGNC:17397 Entrez Gene: 8815

Expression Profile of BANF1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-134-5p YES YES NO hsa-miR-150-5p YES YES NO hsa-miR-28-5p YES YES NO hsa-miR-320a YES YES NO hsa-miR-320b YES YES NO hsa-miR-320c YES YES NO hsa-miR-320d YES YES NO hsa-miR-335-5p YES YES NO hsa-miR-382-5p YES YES NO hsa-miR-708-5p YES YES NO Display: