ctcRbase

Entry Detail

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General Information

Database ID: BRCA01091 Cancer Type: breast cancer Dataset: GSE109761 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: CALM1 Full Name: calmodulin 1 Category: mRNA Synonyms: CALML2|CAM2|CAM3|CAMB|CAMC|CAMI|CAMIII|CPVT4|DD132|LQT14|PHKD|caM Chromosome: chr14 Strand: + Coordinate: Start Site(bp): 90396502 End Site(bp): 90408261 Gene Summary: This gene encodes a member of the EF-hand calcium-binding protein family. It is one of three genes which encode an identical calcium binding protein which is one of the four subunits of phosphorylase kinase. Two pseudogenes have been identified on chromosome 7 and X. Multiple transcript variants encoding different isoforms have been found for this gene.[provided by RefSeq, Oct 2009] External Links: Ensembl ID: ENSG00000198668 HGNC ID: HGNC:1442 Entrez Gene: 801

Expression Profile of CALM1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES NO YES hsa-let-7b-5p YES NO YES hsa-let-7c-5p YES NO YES hsa-let-7d-5p YES NO YES hsa-let-7e-5p YES NO YES hsa-let-7f-5p YES NO YES hsa-let-7g-5p YES NO YES hsa-let-7i-5p YES NO YES hsa-miR-129-5p YES YES YES hsa-miR-1297 YES YES NO hsa-miR-133a-3p YES YES YES hsa-miR-133b YES YES YES hsa-miR-134-5p YES YES NO hsa-miR-1-3p YES NO YES hsa-miR-142-3p YES YES NO hsa-miR-142-5p YES NO YES hsa-miR-147a YES NO NO hsa-miR-148a-3p YES YES NO hsa-miR-148b-3p YES YES NO hsa-miR-152-3p YES YES NO hsa-miR-15a-5p YES YES YES hsa-miR-15b-5p YES YES YES hsa-miR-16-5p YES YES YES hsa-miR-181a-5p YES YES YES hsa-miR-181b-5p YES YES YES hsa-miR-181c-5p YES YES YES hsa-miR-181d-5p YES YES YES hsa-miR-182-5p YES YES NO hsa-miR-191-5p YES YES NO hsa-miR-193a-3p YES YES YES hsa-miR-193b-3p YES YES YES hsa-miR-195-5p YES YES YES hsa-miR-196a-5p YES YES NO hsa-miR-196b-5p YES YES NO hsa-miR-19a-3p YES YES YES hsa-miR-19b-3p YES YES YES hsa-miR-205-5p YES YES NO hsa-miR-206 YES NO YES hsa-miR-218-5p YES NO YES hsa-miR-221-3p YES YES NO hsa-miR-222-3p YES YES NO hsa-miR-26a-5p YES YES NO hsa-miR-26b-5p YES YES NO hsa-miR-300 YES YES NO hsa-miR-31-5p YES YES NO hsa-miR-329-3p YES NO NO hsa-miR-330-3p YES NO YES hsa-miR-335-5p YES YES NO hsa-miR-340-5p YES NO YES hsa-miR-362-3p YES YES NO hsa-miR-374a-5p YES YES NO hsa-miR-381-3p YES YES NO hsa-miR-409-3p YES NO YES hsa-miR-410-3p YES YES YES hsa-miR-411-5p YES YES NO hsa-miR-424-5p YES YES YES hsa-miR-425-5p YES NO YES hsa-miR-488-3p YES YES NO hsa-miR-489-3p YES NO YES hsa-miR-497-5p YES YES YES hsa-miR-505-3p YES YES NO hsa-miR-613 YES NO YES hsa-miR-625-5p YES NO NO hsa-miR-655-3p YES NO YES hsa-miR-98-5p YES NO YES Display: