ctcRbase

Entry Detail

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General Information

Database ID: BRCA01371 Cancer Type: breast cancer Dataset: GSE109761 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: RBM3 Full Name: RNA binding motif protein 3 Category: mRNA Synonyms: IS1-RNPL|RNPL Chromosome: chrX Strand: + Coordinate: Start Site(bp): 48574449 End Site(bp): 48579066 Gene Summary: This gene is a member of the glycine-rich RNA-binding protein family and encodes a protein with one RNA recognition motif (RRM) domain. Expression of this gene is induced by cold shock and low oxygen tension. A pseudogene exists on chromosome 1. Multiple alternatively spliced transcript variants that are predicted to encode different isoforms have been characterized although some of these variants fit nonsense-mediated decay (NMD) criteria. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000102317 HGNC ID: HGNC:9900 Entrez Gene: 5935

Expression Profile of RBM3 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-137 YES YES NO hsa-miR-141-3p YES YES NO hsa-miR-200a-3p YES YES NO hsa-miR-340-5p YES YES NO hsa-miR-371a-5p YES YES NO hsa-miR-383-5p YES YES YES hsa-miR-410-3p YES NO YES Display: