Entry Detail



General Information

Database ID:BRCA01427
Cancer Type:breast cancer
Dataset:GSE41245
CTCs/CTM Isolation Method:CTC-Chip



Gene Information

ncRNA Symbol:MSX1
Full Name:msh homeobox 1
Category:mRNA
Synonyms:ECTD3|HOX7|HYD1|STHAG1
Chromosome:chr4
Strand:+
Coordinate:
Start Site(bp):4859666End Site(bp):4863936
Gene Summary:This gene encodes a member of the muscle segment homeobox gene family. The encoded protein functions as a transcriptional repressor during embryogenesis through interactions with components of the core transcription complex and other homeoproteins. It may also have roles in limb-pattern formation, craniofacial development, particularly odontogenesis, and tumor growth inhibition. Mutations in this gene, which was once known as homeobox 7, have been associated with nonsyndromic cleft lip with or without cleft palate 5, Witkop syndrome, Wolf-Hirschom syndrome, and autosomoal dominant hypodontia. [provided by RefSeq, Jul 2008]
External Links:
Ensembl ID:ENSG00000163132
HGNC ID:HGNC:7391
Entrez Gene:4487



Expression Profile of MSX1 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-129-5p
YES
YES
NO
hsa-miR-149-5p
YES
NO
NO
hsa-miR-21-5p
YES
YES
YES
hsa-miR-340-5p
YES
YES
NO
hsa-miR-374a-5p
YES
YES
YES
hsa-miR-374b-5p
YES
YES
YES
hsa-miR-383-5p
YES
YES
NO
hsa-miR-410-3p
YES
YES
NO
hsa-miR-495-3p
YES
YES
YES
hsa-miR-590-5p
YES
YES
YES
hsa-miR-653-5p
YES
YES
NO
Display: