ctcRbase

Entry Detail

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General Information

Database ID: BRCA01755 Cancer Type: breast cancer Dataset: GSE41245 CTCs/CTM Isolation Method: CTC-Chip

Gene Information

ncRNA Symbol: ATG13 Full Name: autophagy related 13 Category: mRNA Synonyms: KIAA0652|PARATARG8 Chromosome: chr11 Strand: + Coordinate: Start Site(bp): 46617527 End Site(bp): 46674818 Gene Summary: The protein encoded by this gene is an autophagy factor and a target of the TOR kinase signaling pathway. The encoded protein is essential for autophagosome formation and mitophagy. [provided by RefSeq, Oct 2016] External Links: Ensembl ID: ENSG00000175224 HGNC ID: HGNC:29091 Entrez Gene: 9776

Expression Profile of ATG13 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1-3p YES YES YES hsa-miR-146a-5p YES YES NO hsa-miR-146b-5p YES YES NO hsa-miR-15a-5p YES NO YES hsa-miR-15b-5p YES NO YES hsa-miR-16-5p YES NO YES hsa-miR-195-5p YES NO YES hsa-miR-206 YES YES YES hsa-miR-224-5p YES NO YES hsa-miR-31-5p YES YES NO hsa-miR-34a-5p YES YES NO hsa-miR-34c-5p YES YES NO hsa-miR-371a-5p YES YES YES hsa-miR-424-5p YES NO YES hsa-miR-449a YES YES NO hsa-miR-449b-5p YES YES NO hsa-miR-490-3p YES YES NO hsa-miR-497-5p YES NO YES hsa-miR-503-5p YES NO NO hsa-miR-613 YES YES YES hsa-miR-665 YES NO YES Display: