ctcRbase

Entry Detail

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General Information

Database ID: BRCA01839 Cancer Type: breast cancer Dataset: GSE41245 CTCs/CTM Isolation Method: CTC-Chip

Gene Information

ncRNA Symbol: ZIC1 Full Name: Zic family member 1 Category: mRNA Synonyms: CRS6|ZIC|ZNF201 Chromosome: chr3 Strand: + Coordinate: Start Site(bp): 147393422 End Site(bp): 147510293 Gene Summary: This gene encodes a member of the ZIC family of C2H2-type zinc finger proteins. Members of this family are important during development. Aberrant expression of this gene is seen in medulloblastoma, a childhood brain tumor. This gene is closely linked to the gene encoding zinc finger protein of the cerebellum 4, a related family member on chromosome 3. This gene encodes a transcription factor that can bind and transactivate the apolipoprotein E gene. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000152977 HGNC ID: HGNC:12872 Entrez Gene: 7545

Expression Profile of ZIC1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-101-3p YES YES YES hsa-miR-194-5p YES NO YES hsa-miR-217 YES NO YES hsa-miR-23a-3p YES YES YES hsa-miR-23b-3p YES YES YES hsa-miR-299-3p YES YES NO hsa-miR-375 YES YES NO hsa-miR-410-3p YES YES NO hsa-miR-421 YES YES NO hsa-miR-487b-3p YES YES NO hsa-miR-543 YES YES NO Display: