Entry Detail



General Information

Database ID:BRCA01993
Cancer Type:breast cancer
Dataset:GSE41245
CTCs/CTM Isolation Method:CTC-Chip



Gene Information

ncRNA Symbol:RBMS3
Full Name:RNA binding motif single stranded interacting protein 3
Category:mRNA
Synonyms:-
Chromosome:chr3
Strand:+
Coordinate:
Start Site(bp):28574791End Site(bp):30010391
Gene Summary:This gene encodes an RNA-binding protein that belongs to the c-myc gene single-strand binding protein family. These proteins are characterized by the presence of two sets of ribonucleoprotein consensus sequence (RNP-CS) that contain conserved motifs, RNP1 and RNP2, originally described in RNA binding proteins, and required for DNA binding. These proteins have been implicated in such diverse functions as DNA replication, gene transcription, cell cycle progression and apoptosis. The encoded protein was isolated by virtue of its binding to an upstream element of the alpha2(I) collagen promoter. The observation that this protein localizes mostly in the cytoplasm suggests that it may be involved in a cytoplasmic function such as controlling RNA metabolism, rather than transcription. Multiple alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Apr 2010]
External Links:
Ensembl ID:ENSG00000144642
HGNC ID:HGNC:13427
Entrez Gene:27303



Expression Profile of RBMS3 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-129-5p
YES
YES
YES
hsa-miR-141-3p
YES
YES
NO
hsa-miR-155-5p
YES
YES
YES
hsa-miR-19a-3p
YES
YES
YES
hsa-miR-19b-3p
YES
YES
YES
hsa-miR-200a-3p
YES
YES
NO
hsa-miR-205-5p
YES
YES
NO
hsa-miR-21-5p
YES
YES
YES
hsa-miR-320a
YES
YES
YES
hsa-miR-320b
YES
YES
YES
hsa-miR-320c
YES
YES
YES
hsa-miR-320d
YES
YES
YES
hsa-miR-421
YES
YES
NO
hsa-miR-505-3p
YES
YES
YES
hsa-miR-542-3p
YES
YES
NO
hsa-miR-582-5p
YES
NO
YES
hsa-miR-590-5p
YES
YES
YES
hsa-miR-7-5p
YES
YES
YES
hsa-miR-9-5p
YES
YES
YES
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