ctcRbase

Entry Detail

---



General Information

Database ID: BRCA02097 Cancer Type: breast cancer Dataset: GSE111065 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: HM13 Full Name: histocompatibility minor 13 Category: mRNA Synonyms: H13|IMP1|IMPAS|IMPAS-1|MSTP086|PSENL3|PSL3|SPP|SPPL1 Chromosome: chr20 Strand: + Coordinate: Start Site(bp): 31514428 End Site(bp): 31577923 Gene Summary: The protein encoded by this gene, which localizes to the endoplasmic reticulum, catalyzes intramembrane proteolysis of some signal peptides after they have been cleaved from a preprotein. This activity is required to generate signal sequence-derived human lymphocyte antigen-E epitopes that are recognized by the immune system, and to process hepatitis C virus core protein. The encoded protein is an integral membrane protein with sequence motifs characteristic of the presenilin-type aspartic proteases. Multiple transcript variants encoding several different isoforms have been found for this gene. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000101294 HGNC ID: HGNC:16435 Entrez Gene: 81502

Expression Profile of HM13 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-139-5p YES YES NO hsa-miR-149-5p YES YES NO hsa-miR-328-3p YES NO YES hsa-miR-455-3p YES NO YES hsa-miR-490-3p YES YES NO hsa-miR-491-5p YES YES NO hsa-miR-668-3p YES NO YES hsa-miR-9-5p YES YES YES Display: