ctcRbase

Entry Detail

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General Information

Database ID: BRCA02136 Cancer Type: breast cancer Dataset: GSE109761 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: SDC4 Full Name: syndecan 4 Category: mRNA Synonyms: SYND4 Chromosome: chr20 Strand: - Coordinate: Start Site(bp): 45325288 End Site(bp): 45348424 Gene Summary: The protein encoded by this gene is a transmembrane (type I) heparan sulfate proteoglycan that functions as a receptor in intracellular signaling. The encoded protein is found as a homodimer and is a member of the syndecan proteoglycan family. This gene is found on chromosome 20, while a pseudogene has been found on chromosome 22. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000124145 HGNC ID: HGNC:10661 Entrez Gene: 6385

Expression Profile of SDC4 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-124-3p YES YES YES hsa-miR-130a-3p YES YES NO hsa-miR-130b-3p YES YES NO hsa-miR-1321 YES NO NO hsa-miR-140-3p YES NO YES hsa-miR-142-3p YES YES NO hsa-miR-18a-5p YES YES NO hsa-miR-18b-5p YES YES NO hsa-miR-194-5p YES YES YES hsa-miR-205-5p YES YES NO hsa-miR-224-5p YES YES YES hsa-miR-301a-3p YES YES NO hsa-miR-301b-3p YES YES NO hsa-miR-31-5p YES YES NO hsa-miR-454-3p YES YES NO hsa-miR-485-5p YES YES NO hsa-miR-490-3p YES YES NO hsa-miR-494-3p YES YES NO hsa-miR-495-3p YES YES NO hsa-miR-506-3p YES YES NO hsa-miR-7-5p YES YES NO hsa-miR-873-5p YES YES NO Display: