ctcRbase

Entry Detail

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General Information

Database ID: BRCA02141 Cancer Type: breast cancer Dataset: GSE109761 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: F11R Full Name: F11 receptor Category: mRNA Synonyms: CD321|JAM|JAM1|JAMA|JCAM|KAT|PAM-1 Chromosome: chr1 Strand: - Coordinate: Start Site(bp): 160995211 End Site(bp): 161021348 Gene Summary: Tight junctions represent one mode of cell-to-cell adhesion in epithelial or endothelial cell sheets, forming continuous seals around cells and serving as a physical barrier to prevent solutes and water from passing freely through the paracellular space. The protein encoded by this immunoglobulin superfamily gene member is an important regulator of tight junction assembly in epithelia. In addition, the encoded protein can act as (1) a receptor for reovirus, (2) a ligand for the integrin LFA1, involved in leukocyte transmigration, and (3) a platelet receptor. Multiple 5' alternatively spliced variants, encoding the same protein, have been identified but their biological validity has not been established. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000158769 HGNC ID: HGNC:14685 Entrez Gene: 50848

Expression Profile of F11R Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-124-3p YES NO YES hsa-miR-145-5p YES YES NO hsa-miR-181b-5p YES YES NO hsa-miR-181c-5p YES YES NO hsa-miR-181d-5p YES YES NO hsa-miR-186-5p YES NO NO hsa-miR-216a-5p YES NO YES hsa-miR-216b-5p YES NO YES hsa-miR-29a-3p YES NO YES hsa-miR-29b-3p YES NO YES hsa-miR-29c-3p YES NO YES hsa-miR-329-3p YES NO NO hsa-miR-338-3p YES NO YES hsa-miR-340-5p YES YES NO hsa-miR-362-3p YES NO NO hsa-miR-376c-3p YES YES NO hsa-miR-425-5p YES YES NO hsa-miR-489-3p YES NO YES hsa-miR-494-3p YES YES YES hsa-miR-495-3p YES YES NO hsa-miR-503-5p YES YES NO hsa-miR-506-3p YES NO YES hsa-miR-543 YES YES NO hsa-miR-876-5p YES YES NO Display: