Entry Detail



General Information

Database ID:BRCA02170
Cancer Type:breast cancer
Dataset:GSE41245
CTCs/CTM Isolation Method:CTC-Chip



Gene Information

ncRNA Symbol:TAF13
Full Name:TATA-box binding protein associated factor 13
Category:mRNA
Synonyms:MRT60|TAF(II)18|TAF2K|TAFII-18|TAFII18
Chromosome:chr1
Strand:-
Coordinate:
Start Site(bp):109062486End Site(bp):109076002
Gene Summary:Initiation of transcription by RNA polymerase II requires the activities of more than 70 polypeptides. The protein that coordinates these activities is transcription factor IID (TFIID), which binds to the core promoter to position the polymerase properly, serves as the scaffold for assembly of the remainder of the transcription complex, and acts as a channel for regulatory signals. TFIID is composed of the TATA-binding protein (TBP) and a group of evolutionarily conserved proteins known as TBP-associated factors or TAFs. TAFs may participate in basal transcription, serve as coactivators, function in promoter recognition or modify general transcription factors (GTFs) to facilitate complex assembly and transcription initiation. This gene encodes a small subunit associated with a subset of TFIID complexes. This subunit interacts with TBP and with two other small subunits of TFIID, TAF10 and TAF11. There is a pseudogene located on chromosome 6. [provided by RefSeq, Jul 2008]
External Links:
Ensembl ID:ENSG00000197780
HGNC ID:HGNC:11546
Entrez Gene:6884



Expression Profile of TAF13 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-124-3p
YES
YES
NO
hsa-miR-135a-5p
YES
YES
NO
hsa-miR-135b-5p
YES
YES
NO
hsa-miR-136-5p
YES
YES
NO
hsa-miR-300
YES
YES
NO
hsa-miR-361-5p
YES
YES
NO
hsa-miR-381-3p
YES
YES
NO
hsa-miR-506-3p
YES
YES
NO
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