ctcRbase

Entry Detail

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General Information

Database ID: BRCA02242 Cancer Type: breast cancer Dataset: GSE41245 CTCs/CTM Isolation Method: CTC-Chip

Gene Information

ncRNA Symbol: TRA2A Full Name: transformer 2 alpha homolog Category: mRNA Synonyms: AWMS1|HSU53209 Chromosome: chr7 Strand: - Coordinate: Start Site(bp): 23504780 End Site(bp): 23532041 Gene Summary: This gene is a member of the transformer 2 homolog family and encodes a protein with several RRM (RNA recognition motif) domains. This phosphorylated nuclear protein binds to specific RNA sequences and plays a role in the regulation of pre-mRNA splicing. Alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Sep 2013] External Links: Ensembl ID: ENSG00000164548 HGNC ID: HGNC:16645 Entrez Gene: 29896

Expression Profile of TRA2A Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-144-3p YES YES NO hsa-miR-216a-5p YES YES NO hsa-miR-300 YES YES NO hsa-miR-374a-5p YES YES NO hsa-miR-374b-5p YES YES NO hsa-miR-377-3p YES YES NO hsa-miR-381-3p YES YES NO hsa-miR-425-5p YES YES NO hsa-miR-433-3p YES YES NO hsa-miR-490-3p YES YES NO hsa-miR-495-3p YES YES NO hsa-miR-496 YES YES NO Display: