ctcRbase

Entry Detail

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General Information

Database ID: BRCA02255 Cancer Type: breast cancer Dataset: GSE109761 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: CNN3 Full Name: calponin 3 Category: mRNA Synonyms: - Chromosome: chr1 Strand: - Coordinate: Start Site(bp): 94896949 End Site(bp): 94927278 Gene Summary: This gene encodes a protein with a markedly acidic C terminus; the basic N-terminus is highly homologous to the N-terminus of a related gene, CNN1. Members of the CNN gene family all contain similar tandemly repeated motifs. This encoded protein is associated with the cytoskeleton but is not involved in contraction. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000117519 HGNC ID: HGNC:2157 Entrez Gene: 1266

Expression Profile of CNN3 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-103a-3p YES YES NO hsa-miR-107 YES YES NO hsa-miR-124-3p YES YES YES hsa-miR-1271-5p YES YES NO hsa-miR-128-3p YES YES YES hsa-miR-129-5p YES YES NO hsa-miR-1-3p YES YES YES hsa-miR-144-3p YES YES YES hsa-miR-153-3p YES YES YES hsa-miR-182-5p YES YES YES hsa-miR-190a-5p YES YES NO hsa-miR-190b YES YES NO hsa-miR-200b-3p YES YES YES hsa-miR-200c-3p YES YES YES hsa-miR-206 YES YES YES hsa-miR-21-5p YES YES NO hsa-miR-219a-5p YES YES NO hsa-miR-27a-3p YES YES YES hsa-miR-27b-3p YES YES YES hsa-miR-300 YES YES NO hsa-miR-340-5p YES YES NO hsa-miR-374b-5p YES YES NO hsa-miR-375 YES YES NO hsa-miR-381-3p YES YES NO hsa-miR-384 YES YES NO hsa-miR-410-3p YES YES NO hsa-miR-429 YES YES YES hsa-miR-433-3p YES YES NO hsa-miR-448 YES YES NO hsa-miR-494-3p YES YES NO hsa-miR-506-3p YES YES YES hsa-miR-543 YES YES NO hsa-miR-590-5p YES YES NO hsa-miR-613 YES YES YES hsa-miR-7-5p YES YES YES hsa-miR-96-5p YES YES NO Display: