Entry Detail



General Information

Database ID:BRCA02263
Cancer Type:breast cancer
Dataset:GSE55807
CTCs/CTM Isolation Method:CTC-iChip



Gene Information

ncRNA Symbol:SF3B6
Full Name:splicing factor 3b subunit 6
Category:mRNA
Synonyms:CGI-110|HSPC175|Ht006|P14|SAP14|SAP14a|SF3B14|SF3B14a
Chromosome:chr2
Strand:-
Coordinate:
Start Site(bp):24067584End Site(bp):24076443
Gene Summary:This gene encodes a 14 kDa protein subunit of the splicing factor 3b complex. Splicing factor 3b associates with both the U2 and U11/U12 small nuclear ribonucleoprotein complexes (U2 snRNP) of spliceosomes. This 14 kDa protein interacts directly with subunit 1 of the splicing factor 3b complex. This 14 kDa protein also interacts directly with the adenosine that carries out the first transesterification step of splicing at the pre-mRNA branch site. [provided by RefSeq, Jul 2008]
External Links:
Ensembl ID:ENSG00000115128
HGNC ID:HGNC:30096
Entrez Gene:51639



Expression Profile of SF3B6 Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-18a-5p
YES
YES
NO
hsa-miR-18b-5p
YES
YES
NO
hsa-miR-221-3p
YES
YES
NO
hsa-miR-222-3p
YES
YES
NO
hsa-miR-371a-5p
YES
YES
NO
Display: