ctcRbase

Entry Detail

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General Information

Database ID: BRCA02357 Cancer Type: breast cancer Dataset: GSE109761 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: CAPN2 Full Name: calpain 2 Category: mRNA Synonyms: CANP2|CANPL2|CANPml|mCANP Chromosome: chr1 Strand: + Coordinate: Start Site(bp): 223701593 End Site(bp): 223776018 Gene Summary: The calpains, calcium-activated neutral proteases, are nonlysosomal, intracellular cysteine proteases. The mammalian calpains include ubiquitous, stomach-specific, and muscle-specific proteins. The ubiquitous enzymes consist of heterodimers with distinct large, catalytic subunits associated with a common small, regulatory subunit. This gene encodes the large subunit of the ubiquitous enzyme, calpain 2. Multiple heterogeneous transcriptional start sites in the 5' UTR have been reported. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Mar 2009] External Links: Ensembl ID: ENSG00000162909 HGNC ID: HGNC:1479 Entrez Gene: 824

Expression Profile of CAPN2 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-101-3p YES YES NO hsa-miR-106a-5p YES YES NO hsa-miR-106b-5p YES YES NO hsa-miR-124-3p YES NO YES hsa-miR-129-5p YES YES NO hsa-miR-132-3p YES YES NO hsa-miR-137 YES YES YES hsa-miR-144-3p YES YES NO hsa-miR-17-5p YES YES NO hsa-miR-190a-5p YES YES NO hsa-miR-190b YES YES NO hsa-miR-20a-5p YES YES NO hsa-miR-20b-5p YES YES NO hsa-miR-212-3p YES YES NO hsa-miR-21-5p YES YES NO hsa-miR-320a YES YES NO hsa-miR-320b YES YES NO hsa-miR-320c YES YES NO hsa-miR-320d YES YES NO hsa-miR-374a-5p YES YES NO hsa-miR-421 YES YES NO hsa-miR-433-3p YES YES NO hsa-miR-495-3p YES YES NO hsa-miR-519d-3p YES YES NO hsa-miR-590-5p YES YES NO hsa-miR-599 YES YES NO hsa-miR-7-5p YES YES NO hsa-miR-875-5p YES YES NO hsa-miR-93-5p YES YES NO Display: