ctcRbase

Entry Detail

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General Information

Database ID: BRCA02380 Cancer Type: breast cancer Dataset: GSE51827 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: HDGF Full Name: heparin binding growth factor Category: mRNA Synonyms: HMG1L2 Chromosome: chr1 Strand: - Coordinate: Start Site(bp): 156742107 End Site(bp): 156766925 Gene Summary: This gene encodes a member of the hepatoma-derived growth factor family. The encoded protein has mitogenic and DNA-binding activity and may play a role in cellular proliferation and differentiation. High levels of expression of this gene enhance the growth of many tumors. This gene was thought initially to be located on chromosome X; however, that location has been determined to correspond to a related pseudogene. Alternatively spliced transcript variants encoding distinct isoforms have been described. [provided by RefSeq, Jan 2016] External Links: Ensembl ID: ENSG00000143321 HGNC ID: HGNC:4856 Entrez Gene: 3068

Expression Profile of HDGF Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-129-5p YES YES YES hsa-miR-139-5p YES YES YES hsa-miR-141-3p YES YES NO hsa-miR-148a-3p YES NO YES hsa-miR-148b-3p YES NO YES hsa-miR-150-5p YES YES NO hsa-miR-152-3p YES NO YES hsa-miR-15a-5p YES YES YES hsa-miR-15b-5p YES YES YES hsa-miR-16-5p YES YES YES hsa-miR-185-5p YES YES NO hsa-miR-195-5p YES YES YES hsa-miR-200a-3p YES YES NO hsa-miR-214-3p YES YES NO hsa-miR-29a-3p YES NO YES hsa-miR-29b-3p YES NO YES hsa-miR-29c-3p YES NO YES hsa-miR-370-3p YES YES NO hsa-miR-384 YES YES YES hsa-miR-424-5p YES YES YES hsa-miR-425-5p YES YES NO hsa-miR-497-5p YES YES YES hsa-miR-543 YES YES NO hsa-miR-873-5p YES YES YES Display: