ctcRbase

Entry Detail

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General Information

Database ID: BRCA02443 Cancer Type: breast cancer Dataset: GSE41245 CTCs/CTM Isolation Method: CTC-Chip

Gene Information

ncRNA Symbol: CELF1 Full Name: CUGBP Elav-like family member 1 Category: mRNA Synonyms: BRUNOL2|CUG-BP|CUGBP|CUGBP1|EDEN-BP|NAB50|NAPOR|hNab50 Chromosome: chr11 Strand: - Coordinate: Start Site(bp): 47465933 End Site(bp): 47565569 Gene Summary: Members of the CELF/BRUNOL protein family contain two N-terminal RNA recognition motif (RRM) domains, one C-terminal RRM domain, and a divergent segment of 160-230 aa between the second and third RRM domains. Members of this protein family regulate pre-mRNA alternative splicing and may also be involved in mRNA editing, and translation. This gene may play a role in myotonic dystrophy type 1 (DM1) via interactions with the dystrophia myotonica-protein kinase (DMPK) gene. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000149187 HGNC ID: HGNC:2549 Entrez Gene: 10658

Expression Profile of CELF1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-103a-3p YES YES NO hsa-miR-107 YES YES NO hsa-miR-1271-5p YES YES YES hsa-miR-129-5p NO YES YES hsa-miR-1297 NO YES YES hsa-miR-133a-3p NO YES YES hsa-miR-133b NO YES YES hsa-miR-140-5p YES YES YES hsa-miR-141-3p NO YES YES hsa-miR-182-5p YES YES YES hsa-miR-183-5p NO YES YES hsa-miR-186-5p YES YES NO hsa-miR-200a-3p NO YES YES hsa-miR-200b-3p NO YES YES hsa-miR-200c-3p NO YES YES hsa-miR-205-5p YES YES NO hsa-miR-214-3p YES YES NO hsa-miR-26a-5p NO YES YES hsa-miR-26b-5p NO YES YES hsa-miR-27a-3p YES YES YES hsa-miR-27b-3p YES YES YES hsa-miR-382-5p YES YES NO hsa-miR-421 YES YES NO hsa-miR-429 NO YES YES hsa-miR-494-3p YES YES NO hsa-miR-495-3p YES NO YES hsa-miR-505-3p YES YES NO hsa-miR-542-3p YES YES NO hsa-miR-96-5p YES YES YES Display: