ctcRbase

Entry Detail

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General Information

Database ID: BRCA02503 Cancer Type: breast cancer Dataset: GSE109761 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: SEC61A1 Full Name: Sec61 translocon alpha 1 subunit Category: mRNA Synonyms: HNFJ4|HSEC61|SEC61|SEC61A Chromosome: chr3 Strand: + Coordinate: Start Site(bp): 128051641 End Site(bp): 128071683 Gene Summary: The protein encoded by this gene belongs to the SECY/SEC61- alpha family. It appears to play a crucial role in the insertion of secretory and membrane polypeptides into the endoplasmic reticulum. This protein found to be tightly associated with membrane-bound ribosomes, either directly or through adaptor proteins. This gene encodes an alpha subunit of the heteromeric SEC61 complex, which also contains beta and gamma subunits. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000058262 HGNC ID: HGNC:18276 Entrez Gene: 29927

Expression Profile of SEC61A1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-128-3p YES YES YES hsa-miR-129-5p YES YES YES hsa-miR-132-3p YES YES NO hsa-miR-1-3p YES NO YES hsa-miR-141-3p YES YES NO hsa-miR-149-5p YES YES NO hsa-miR-152-3p YES YES NO hsa-miR-186-5p YES YES YES hsa-miR-18a-5p YES YES NO hsa-miR-18b-5p YES YES NO hsa-miR-193a-3p YES YES NO hsa-miR-193a-5p YES NO YES hsa-miR-193b-3p YES YES NO hsa-miR-19a-3p YES YES YES hsa-miR-19b-3p YES YES YES hsa-miR-200a-3p YES YES NO hsa-miR-204-5p YES YES NO hsa-miR-206 YES NO YES hsa-miR-211-5p YES YES NO hsa-miR-212-3p YES YES NO hsa-miR-218-5p YES YES YES hsa-miR-223-3p YES YES NO hsa-miR-27a-3p YES YES NO hsa-miR-27b-3p YES YES NO hsa-miR-299-3p YES YES NO hsa-miR-331-3p YES NO YES hsa-miR-491-5p YES YES NO hsa-miR-542-3p YES YES YES hsa-miR-613 YES NO YES Display: