ctcRbase

Entry Detail

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General Information

Database ID: BRCA02592 Cancer Type: breast cancer Dataset: GSE55807 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: ATG3 Full Name: autophagy related 3 Category: mRNA Synonyms: APG3|APG3-LIKE|APG3L|PC3-96 Chromosome: chr3 Strand: - Coordinate: Start Site(bp): 112532509 End Site(bp): 112562046 Gene Summary: This gene encodes a ubiquitin-like-conjugating enzyme and is a component of ubiquitination-like systems involved in autophagy, the process of degradation, turnover and recycling of cytoplasmic constituents in eukaryotic cells. This protein is known to play a role in regulation of autophagy during cell death. A pseudogene of this gene is located on chromosome 20. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Jul 2013] External Links: Ensembl ID: ENSG00000144848 HGNC ID: HGNC:20962 Entrez Gene: 64422

Expression Profile of ATG3 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-138-5p YES YES NO hsa-miR-1-3p NO YES YES hsa-miR-142-3p YES YES NO hsa-miR-153-3p YES YES NO hsa-miR-155-5p YES YES NO hsa-miR-204-5p YES YES NO hsa-miR-206 NO YES YES hsa-miR-211-5p YES YES NO hsa-miR-23a-3p YES YES NO hsa-miR-23b-3p YES YES NO hsa-miR-410-3p YES YES NO hsa-miR-448 YES YES NO hsa-miR-613 NO YES YES Display: