ctcRbase

Entry Detail

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General Information

Database ID: BRCA02597 Cancer Type: breast cancer Dataset: GSE41245 CTCs/CTM Isolation Method: CTC-Chip

Gene Information

ncRNA Symbol: DDX6 Full Name: DEAD-box helicase 6 Category: mRNA Synonyms: HLR2|P54|RCK Chromosome: chr11 Strand: - Coordinate: Start Site(bp): 118747766 End Site(bp): 118791149 Gene Summary: This gene encodes a member of the DEAD box protein family. The protein is an RNA helicase found in P-bodies and stress granules, and functions in translation suppression and mRNA degradation. It is required for microRNA-induced gene silencing. Multiple alternatively spliced variants, encoding the same protein, have been identified. [provided by RefSeq, Mar 2012] External Links: Ensembl ID: ENSG00000110367 HGNC ID: HGNC:2747 Entrez Gene: 1656

Expression Profile of DDX6 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-124-3p YES YES YES hsa-miR-128-3p YES YES YES hsa-miR-129-5p YES YES NO hsa-miR-1297 YES YES NO hsa-miR-130a-3p YES YES YES hsa-miR-130b-3p YES YES YES hsa-miR-139-5p YES YES NO hsa-miR-148a-3p YES YES YES hsa-miR-148b-3p YES YES YES hsa-miR-152-3p YES YES YES hsa-miR-191-5p YES YES NO hsa-miR-192-5p YES YES NO hsa-miR-19a-3p YES YES YES hsa-miR-19b-3p YES YES YES hsa-miR-205-5p YES YES YES hsa-miR-215-5p YES YES NO hsa-miR-218-5p YES YES NO hsa-miR-221-3p YES YES NO hsa-miR-26a-5p YES YES NO hsa-miR-26b-5p YES YES NO hsa-miR-29a-3p NO YES YES hsa-miR-29b-3p NO YES YES hsa-miR-29c-3p NO YES YES hsa-miR-300 YES YES YES hsa-miR-301a-3p YES YES YES hsa-miR-301b-3p YES YES YES hsa-miR-329-3p YES YES YES hsa-miR-338-3p YES YES NO hsa-miR-362-3p YES YES YES hsa-miR-371a-5p YES YES NO hsa-miR-381-3p YES YES YES hsa-miR-423-5p YES NO YES hsa-miR-448 YES YES YES hsa-miR-454-3p YES YES YES hsa-miR-483-3p YES NO YES hsa-miR-506-3p YES YES YES hsa-miR-653-5p YES YES NO Display: