ctcRbase

Entry Detail

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General Information

Database ID: BRCA02796 Cancer Type: breast cancer Dataset: GSE109761 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: TFG Full Name: TRK-fused gene Category: mRNA Synonyms: HMSNP|SPG57|TF6|TRKT3 Chromosome: chr3 Strand: + Coordinate: Start Site(bp): 100709331 End Site(bp): 100748966 Gene Summary: There are several documented fusion oncoproteins encoded partially by this gene. This gene also participates in several oncogenic rearrangements resulting in anaplastic lymphoma and mixoid chondrosarcoma, and may play a role in the NF-kappaB pathway. Multiple transcript variants have been found for this gene. [provided by RefSeq, Sep 2010] External Links: Ensembl ID: ENSG00000114354 HGNC ID: HGNC:11758 Entrez Gene: 10342

Expression Profile of TFG Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1297 YES YES NO hsa-miR-133a-3p YES YES YES hsa-miR-133b YES YES YES hsa-miR-142-3p YES YES YES hsa-miR-15a-5p YES YES NO hsa-miR-15b-5p YES YES NO hsa-miR-16-5p YES YES NO hsa-miR-195-5p YES YES NO hsa-miR-221-3p YES YES YES hsa-miR-222-3p YES YES YES hsa-miR-22-3p YES YES NO hsa-miR-26a-5p YES YES NO hsa-miR-26b-5p YES YES NO hsa-miR-300 YES YES NO hsa-miR-338-3p YES YES YES hsa-miR-371a-5p YES YES NO hsa-miR-381-3p YES YES NO hsa-miR-497-5p YES YES NO Display: