ctcRbase

Entry Detail

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General Information

Database ID: BRCA02820 Cancer Type: breast cancer Dataset: GSE41245 CTCs/CTM Isolation Method: CTC-Chip

Gene Information

ncRNA Symbol: SRGAP2 Full Name: SLIT-ROBO Rho GTPase activating protein 2 Category: mRNA Synonyms: ARHGAP34|FNBP2|SRGAP2A|SRGAP3 Chromosome: chr1 Strand: + Coordinate: Start Site(bp): 206203345 End Site(bp): 206464443 Gene Summary: This locus encodes a member of the SLIT-ROBO Rho GTPase activating protein family. The encoded protein stimulates GTPase activity of Rac1, and plays a role in cortical neuron development. This locus has several paralogs on human chromosome 1 resulting from segmental duplication. While this locus itself is conserved among various species, the paralogs are found only in the genus Homo, and not in the genomes of non-human great apes. Alternatively spliced transcript variants have been described for this locus. [provided by RefSeq, Jul 2014] External Links: Ensembl ID: ENSG00000266028 HGNC ID: HGNC:19751 Entrez Gene: 23380

Expression Profile of SRGAP2 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-101-3p YES YES NO hsa-miR-103a-3p YES YES NO hsa-miR-106a-5p YES YES NO hsa-miR-106b-5p YES YES NO hsa-miR-107 YES YES NO hsa-miR-124-3p YES YES NO hsa-miR-128-3p YES YES YES hsa-miR-129-2-3p YES NO YES hsa-miR-130a-3p YES YES NO hsa-miR-130b-3p YES YES NO hsa-miR-132-3p YES YES YES hsa-miR-141-3p YES YES NO hsa-miR-145-5p YES YES YES hsa-miR-15a-5p YES YES NO hsa-miR-15b-5p YES YES NO hsa-miR-16-5p YES YES NO hsa-miR-17-5p YES YES NO hsa-miR-181a-5p YES YES YES hsa-miR-181b-5p YES YES YES hsa-miR-181c-5p YES YES YES hsa-miR-181d-5p YES YES YES hsa-miR-185-5p YES YES NO hsa-miR-186-5p YES YES YES hsa-miR-195-5p YES YES NO hsa-miR-19a-3p YES YES NO hsa-miR-19b-3p YES YES NO hsa-miR-200a-3p YES YES NO hsa-miR-20a-5p YES YES NO hsa-miR-20b-5p YES YES NO hsa-miR-212-3p YES YES YES hsa-miR-218-5p YES YES YES hsa-miR-27a-3p YES YES YES hsa-miR-27b-3p YES YES YES hsa-miR-296-3p YES YES NO hsa-miR-300 YES YES YES hsa-miR-301a-3p YES YES NO hsa-miR-301b-3p YES YES NO hsa-miR-330-3p YES NO YES hsa-miR-335-5p YES YES NO hsa-miR-377-3p YES YES YES hsa-miR-381-3p YES YES YES hsa-miR-382-5p YES YES YES hsa-miR-421 YES YES NO hsa-miR-424-5p YES YES NO hsa-miR-433-3p YES YES NO hsa-miR-454-3p YES YES NO hsa-miR-485-5p YES YES NO hsa-miR-494-3p YES YES NO hsa-miR-497-5p YES YES NO hsa-miR-499a-5p YES YES NO hsa-miR-506-3p YES NO YES hsa-miR-519d-3p YES YES NO hsa-miR-542-3p YES YES YES hsa-miR-665 YES NO YES hsa-miR-7-5p YES NO YES hsa-miR-876-5p YES NO YES hsa-miR-93-5p YES YES NO hsa-miR-9-5p YES YES NO Display: