ctcRbase

Entry Detail

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General Information

Database ID: BRCA02880 Cancer Type: breast cancer Dataset: GSE55807 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: CLNS1A Full Name: chloride nucleotide-sensitive channel 1A Category: mRNA Synonyms: CLCI|CLNS1B|ICln Chromosome: chr11 Strand: - Coordinate: Start Site(bp): 77514936 End Site(bp): 77637805 Gene Summary: This gene encodes a protein that functions in multiple regulatory pathways. The encoded protein complexes with numerous cytosolic proteins and performs diverse functions including regulation of small nuclear ribonucleoprotein biosynthesis, platelet activation and cytoskeletal organization. The protein is also found associated with the plasma membrane where it functions as a chloride current regulator. Pseudogenes of this gene are found on chromosomes 1, 4 and 6. Several transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2015] External Links: Ensembl ID: ENSG00000074201 HGNC ID: HGNC:2080 Entrez Gene: 1207

Expression Profile of CLNS1A Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1297 YES YES NO hsa-miR-138-5p YES YES YES hsa-miR-154-5p YES YES NO hsa-miR-197-3p YES YES NO hsa-miR-26a-5p YES YES NO hsa-miR-26b-5p YES YES NO hsa-miR-28-5p YES YES NO hsa-miR-30a-5p YES YES NO hsa-miR-30b-5p YES YES NO hsa-miR-30c-5p YES YES NO hsa-miR-30d-5p YES YES NO hsa-miR-30e-5p YES YES NO hsa-miR-376c-3p YES YES NO hsa-miR-495-3p YES YES NO hsa-miR-708-5p YES YES NO Display: