ctcRbase

Entry Detail

---



General Information

Database ID: BRCA02951 Cancer Type: breast cancer Dataset: GSE55807 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: SNRPD1 Full Name: small nuclear ribonucleoprotein D1 polypeptide Category: mRNA Synonyms: HsT2456|SMD1|SNRPD|Sm-D1 Chromosome: chr18 Strand: + Coordinate: Start Site(bp): 21612267 End Site(bp): 21633524 Gene Summary: This gene encodes a small nuclear ribonucleoprotein that belongs to the SNRNP core protein family. The protein may act as a charged protein scaffold to promote SNRNP assembly or strengthen SNRNP-SNRNP interactions through nonspecific electrostatic contacts with RNA. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, May 2014] External Links: Ensembl ID: ENSG00000167088 HGNC ID: HGNC:11158 Entrez Gene: 6632

Expression Profile of SNRPD1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-141-3p YES YES NO hsa-miR-148a-3p YES YES NO hsa-miR-148b-3p YES YES NO hsa-miR-152-3p YES YES NO hsa-miR-200a-3p YES YES NO hsa-miR-216a-5p YES YES NO hsa-miR-30a-5p YES YES NO hsa-miR-30b-5p YES YES NO hsa-miR-30c-5p YES YES NO hsa-miR-30d-5p YES YES NO hsa-miR-30e-5p YES YES NO hsa-miR-323a-3p YES NO NO hsa-miR-376c-3p YES YES NO hsa-miR-448 YES YES NO hsa-miR-486-5p YES YES NO hsa-miR-490-3p YES YES NO hsa-miR-495-3p YES YES NO Display: