ctcRbase

Entry Detail

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General Information

Database ID: BRCA03061 Cancer Type: breast cancer Dataset: GSE109761 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: VAT1 Full Name: vesicle amine transport 1 Category: mRNA Synonyms: VATI Chromosome: chr17 Strand: - Coordinate: Start Site(bp): 43014605 End Site(bp): 43025123 Gene Summary: Synaptic vesicles are responsible for regulating the storage and release of neurotransmitters in the nerve terminal. The protein encoded by this gene is an abundant integral membrane protein of cholinergic synaptic vesicles and is thought to be involved in vesicular transport. It belongs to the quinone oxidoreductase subfamily of zinc-containing alcohol dehydrogenase proteins. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000108828 HGNC ID: HGNC:16919 Entrez Gene: 10493

Expression Profile of VAT1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-124-3p YES YES YES hsa-miR-1271-5p YES YES YES hsa-miR-133a-3p YES YES YES hsa-miR-133b YES YES YES hsa-miR-1-3p YES YES YES hsa-miR-146a-5p YES YES NO hsa-miR-146b-5p YES YES NO hsa-miR-15a-5p YES YES YES hsa-miR-15b-5p YES YES YES hsa-miR-16-5p YES YES YES hsa-miR-182-5p YES NO YES hsa-miR-183-5p YES YES NO hsa-miR-184 YES YES NO hsa-miR-185-5p YES YES NO hsa-miR-195-5p YES YES YES hsa-miR-206 YES YES YES hsa-miR-218-5p YES YES YES hsa-miR-22-3p YES YES NO hsa-miR-30a-5p YES YES YES hsa-miR-30b-5p YES YES YES hsa-miR-30c-5p YES YES YES hsa-miR-30d-5p YES YES YES hsa-miR-30e-5p YES YES YES hsa-miR-339-5p YES NO YES hsa-miR-34a-5p YES YES YES hsa-miR-34c-5p YES YES YES hsa-miR-377-3p YES YES NO hsa-miR-378a-3p YES YES YES hsa-miR-422a YES YES YES hsa-miR-424-5p YES YES YES hsa-miR-449a YES YES YES hsa-miR-449b-5p YES YES YES hsa-miR-485-5p YES YES NO hsa-miR-490-3p YES YES NO hsa-miR-497-5p YES YES YES hsa-miR-506-3p YES YES YES hsa-miR-613 YES YES YES hsa-miR-9-5p YES NO YES hsa-miR-96-5p YES YES YES Display: