ctcRbase

Entry Detail

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General Information

Database ID: BRCA03066 Cancer Type: breast cancer Dataset: GSE55807 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: SLBP Full Name: stem-loop binding protein Category: mRNA Synonyms: HBP Chromosome: chr4 Strand: - Coordinate: Start Site(bp): 1692800 End Site(bp): 1712555 Gene Summary: This gene encodes a protein that binds to the stem-loop structure in replication-dependent histone mRNAs. Histone mRNAs do not contain introns or polyadenylation signals, and are processed by endonucleolytic cleavage. The stem-loop structure is essential for efficient processing but this structure also controls the transport, translation and stability of histone mRNAs. Expression of the protein is regulated during the cell cycle, increasing more than 10-fold during the latter part of G1. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000163950 HGNC ID: HGNC:10904 Entrez Gene: 7884

Expression Profile of SLBP Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-124-3p YES NO YES hsa-miR-129-5p YES YES YES hsa-miR-1297 YES YES NO hsa-miR-132-3p YES YES NO hsa-miR-133a-3p YES YES NO hsa-miR-133b YES YES NO hsa-miR-136-5p YES YES NO hsa-miR-194-5p YES YES NO hsa-miR-208a-3p YES YES NO hsa-miR-208b-3p YES YES NO hsa-miR-212-3p YES YES NO hsa-miR-219a-5p YES YES NO hsa-miR-26a-5p YES YES NO hsa-miR-26b-5p YES YES NO hsa-miR-296-3p YES YES NO hsa-miR-410-3p YES YES NO hsa-miR-454-3p YES YES NO hsa-miR-496 YES YES NO hsa-miR-499a-5p YES YES NO hsa-miR-506-3p YES NO YES Display: