ctcRbase

Entry Detail

---



General Information

Database ID: BRCA03090 Cancer Type: breast cancer Dataset: GSE111065 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: WDR45B Full Name: WD repeat domain 45B Category: mRNA Synonyms: NEDSBAS|WDR45L|WIPI-3|WIPI3 Chromosome: chr17 Strand: - Coordinate: Start Site(bp): 82614562 End Site(bp): 82648553 Gene Summary: This gene encodes a member of the WIPI or SVP1 family of WD40 repeat-containing proteins. The protein contains seven WD40 repeats that are thought to fold into a beta-propeller structure that mediates protein-protein interactions, and a conserved motif for interaction with phospholipids. The human genome contains several pseudogenes of this gene. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000141580 HGNC ID: HGNC:25072 Entrez Gene: 56270

Expression Profile of WDR45B Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-135a-5p YES NO YES hsa-miR-135b-5p YES NO YES hsa-miR-138-5p YES YES NO hsa-miR-146a-5p YES YES NO hsa-miR-146b-5p YES YES NO hsa-miR-181a-5p YES YES NO hsa-miR-181b-5p YES YES NO hsa-miR-181c-5p YES YES NO hsa-miR-181d-5p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-19a-3p YES YES YES hsa-miR-19b-3p YES YES YES hsa-miR-200b-3p YES YES YES hsa-miR-200c-3p YES YES YES hsa-miR-346 YES YES NO hsa-miR-423-5p YES NO NO hsa-miR-429 YES YES YES hsa-miR-433-3p YES YES YES hsa-miR-455-5p YES YES YES hsa-miR-488-3p YES YES NO hsa-miR-494-3p YES YES YES hsa-miR-495-3p YES YES NO hsa-miR-506-3p YES NO YES hsa-miR-542-3p YES YES NO hsa-miR-543 YES YES NO Display: