ctcRbase

Entry Detail

---



General Information

Database ID: BRCA03092 Cancer Type: breast cancer Dataset: GSE111065 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: PDLIM1 Full Name: PDZ and LIM domain 1 Category: mRNA Synonyms: CLIM1|CLP-36|CLP36|HEL-S-112|hCLIM1 Chromosome: chr10 Strand: - Coordinate: Start Site(bp): 95237572 End Site(bp): 95291024 Gene Summary: This gene encodes a member of the enigma protein family. The protein contains two protein interacting domains, a PDZ domain at the amino terminal end and one to three LIM domains at the carboxyl terminal. It is a cytoplasmic protein associated with the cytoskeleton. The protein may function as an adapter to bring other LIM-interacting proteins to the cytoskeleton. Pseudogenes associated with this gene are located on chromosomes 3, 14 and 17. [provided by RefSeq, Oct 2012] External Links: Ensembl ID: ENSG00000107438 HGNC ID: HGNC:2067 Entrez Gene: 9124

Expression Profile of PDLIM1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-128-3p YES YES NO hsa-miR-138-5p YES YES NO hsa-miR-141-3p YES YES NO hsa-miR-146a-5p YES YES NO hsa-miR-146b-5p YES YES NO hsa-miR-200a-3p YES YES NO hsa-miR-320a YES YES NO hsa-miR-320b YES YES NO hsa-miR-320c YES YES NO hsa-miR-320d YES YES NO hsa-miR-495-3p YES YES NO Display: