Entry Detail



General Information

Database ID:BRCA03109
Cancer Type:breast cancer
Dataset:GSE111065
CTCs/CTM Isolation Method:microfluidics immunofluorescence



Gene Information

ncRNA Symbol:DDX39A
Full Name:DExD-box helicase 39A
Category:mRNA
Synonyms:BAT1|BAT1L|DDX39|DDXL|URH49
Chromosome:chr19
Strand:-
Coordinate:
Start Site(bp):14408819End Site(bp):14419383
Gene Summary:This gene encodes a member of the DEAD box protein family. These proteins are characterized by the conserved motif Asp-Glu-Ala-Asp (DEAD) and are putative RNA helicases. They are implicated in a number of cellular processes involving alteration of RNA secondary structure, such as translation initiation, nuclear and mitochondrial splicing, and ribosome and spliceosome assembly. Based on their distribution patterns, some members of the DEAD box protein family are believed to be involved in embryogenesis, spermatogenesis, and cellular growth and division. This gene is thought to play a role in the prognosis of patients with gastrointestinal stromal tumors. A pseudogene of this gene is present on chromosome 13. Alternate splicing results in multiple transcript variants. Additional alternatively spliced transcript variants of this gene have been described, but their full-length nature is not known. [provided by RefSeq, Sep 2013]
External Links:
Ensembl ID:ENSG00000123136
HGNC ID:HGNC:17821
Entrez Gene:10212



Expression Profile of DDX39A Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-216a-5p
YES
YES
NO
hsa-miR-216b-5p
YES
YES
NO
hsa-miR-421
YES
YES
NO
Display: