ctcRbase

Entry Detail

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General Information

Database ID: BRCA03213 Cancer Type: breast cancer Dataset: GSE55807 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: ZCRB1 Full Name: zinc finger CCHC-type and RNA binding motif containing 1 Category: mRNA Synonyms: MADP-1|MADP1|RBM36|SNRNP31|ZCCHC19 Chromosome: chr12 Strand: - Coordinate: Start Site(bp): 42312078 End Site(bp): 42326118 Gene Summary: Pre-mRNA splicing is catalyzed by the spliceosome. U12-type spliceosome binds U12-type pre-mRNAs and recognizes the 5' splice site and branch-point sequence. U11 and U12 snRNPs are components of U12-type spliceosome and function as a molecular bridge connecting both ends of the intron. The protein encoded by this gene contains a RNA recognition motif. It was identified as one of the protein components of U11/U12 snRNPs. This protein and many other U11/U12 snRNP proteins are highly conserved in organisms known to contain U12-type introns. These proteins have been shown to be essential for cell viability, suggesting the key roles in U12-type splicing. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000139168 HGNC ID: HGNC:29620 Entrez Gene: 85437

Expression Profile of ZCRB1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-194-5p YES YES NO hsa-miR-24-3p YES YES NO hsa-miR-30a-5p YES YES NO hsa-miR-30b-5p YES YES NO hsa-miR-30c-5p YES YES NO hsa-miR-30d-5p YES YES NO hsa-miR-30e-5p YES YES NO hsa-miR-410-3p YES YES NO hsa-miR-873-5p YES YES NO Display: