ctcRbase

Entry Detail

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General Information

Database ID: BRCA03215 Cancer Type: breast cancer Dataset: GSE111065 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: SNU13 Full Name: small nuclear ribonucleoprotein 13 Category: mRNA Synonyms: 15.5K|FA-1|FA1|NHP2L1|NHPX|OTK27|SNRNP15-5|SPAG12|SSFA1 Chromosome: chr22 Strand: - Coordinate: Start Site(bp): 41673930 End Site(bp): 41690504 Gene Summary: Originally named because of its sequence similarity to the Saccharomyces cerevisiae NHP2 (non-histone protein 2), this protein appears to be a highly conserved nuclear protein that is a component of the [U4/U6.U5] tri-snRNP. It binds to the 5' stem-loop of U4 snRNA. Two transcript variants encoding the same protein have been found for this gene. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000100138 HGNC ID: HGNC:7819 Entrez Gene: 4809

Expression Profile of SNU13 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-10a-5p YES YES NO hsa-miR-10b-5p YES YES NO hsa-miR-1321 YES NO NO hsa-miR-141-3p YES YES NO hsa-miR-146b-5p YES YES NO hsa-miR-205-5p YES YES YES hsa-miR-214-3p YES YES NO hsa-miR-23a-3p YES YES NO hsa-miR-23b-3p YES YES NO hsa-miR-30e-5p YES YES NO hsa-miR-335-5p YES YES NO hsa-miR-338-3p YES YES NO hsa-miR-542-3p YES YES NO Display: