ctcRbase

Entry Detail

---



General Information

Database ID: BRCA03342 Cancer Type: breast cancer Dataset: GSE109761 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: MAP1LC3B Full Name: microtubule associated protein 1 light chain 3 beta Category: mRNA Synonyms: ATG8F|LC3B|MAP1A/1BLC3|MAP1LC3B-a Chromosome: chr16 Strand: + Coordinate: Start Site(bp): 87383995 End Site(bp): 87404779 Gene Summary: The product of this gene is a subunit of neuronal microtubule-associated MAP1A and MAP1B proteins, which are involved in microtubule assembly and important for neurogenesis. Studies on the rat homolog implicate a role for this gene in autophagy, a process that involves the bulk degradation of cytoplasmic component. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000140941 HGNC ID: HGNC:13352 Entrez Gene: 81631

Expression Profile of MAP1LC3B Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-122-5p YES YES NO hsa-miR-129-5p YES YES NO hsa-miR-145-5p YES YES NO hsa-miR-150-5p YES YES NO hsa-miR-188-5p YES NO YES hsa-miR-192-5p YES YES NO hsa-miR-200b-3p YES YES NO hsa-miR-200c-3p YES YES NO hsa-miR-204-5p YES YES YES hsa-miR-211-5p YES YES YES hsa-miR-215-5p YES YES NO hsa-miR-299-3p YES YES NO hsa-miR-30a-5p YES YES NO hsa-miR-30b-5p YES YES NO hsa-miR-30c-5p YES YES NO hsa-miR-30d-5p YES YES NO hsa-miR-30e-5p YES YES NO hsa-miR-320a YES YES YES hsa-miR-320b YES YES YES hsa-miR-320c YES YES YES hsa-miR-320d YES YES YES hsa-miR-342-3p YES YES NO hsa-miR-382-5p YES YES NO hsa-miR-429 YES YES NO hsa-miR-433-3p YES YES NO hsa-miR-452-5p YES NO YES hsa-miR-495-3p YES YES NO hsa-miR-543 YES YES NO hsa-miR-758-3p YES YES NO hsa-miR-873-5p YES YES NO hsa-miR-93-5p YES YES NO Display: