ctcRbase

Entry Detail

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General Information

Database ID: BRCA03354 Cancer Type: breast cancer Dataset: GSE109761 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: RALY Full Name: RALY heterogeneous nuclear ribonucleoprotein Category: mRNA Synonyms: HNRPCL2|P542 Chromosome: chr20 Strand: + Coordinate: Start Site(bp): 33993646 End Site(bp): 34108308 Gene Summary: This gene encodes a member of the heterogeneous nuclear ribonucleoprotein (hnRNP) gene family. This protein may play a role in pre-mRNA splicing and in embryonic development. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Sep 2011] External Links: Ensembl ID: ENSG00000125970 HGNC ID: HGNC:15921 Entrez Gene: 22913

Expression Profile of RALY Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES YES NO hsa-let-7b-5p YES YES NO hsa-let-7c-5p YES YES NO hsa-let-7d-5p YES YES NO hsa-let-7e-5p YES YES NO hsa-let-7f-5p YES YES NO hsa-let-7g-5p YES YES NO hsa-let-7i-5p YES YES NO hsa-miR-122-5p YES YES YES hsa-miR-138-5p YES NO YES hsa-miR-148a-3p YES YES YES hsa-miR-148b-3p YES YES YES hsa-miR-152-3p YES YES YES hsa-miR-183-5p YES YES NO hsa-miR-196a-5p YES YES NO hsa-miR-196b-5p YES YES NO hsa-miR-216a-5p YES NO YES hsa-miR-216b-5p YES YES YES hsa-miR-34a-5p YES YES YES hsa-miR-34c-5p YES YES YES hsa-miR-370-3p YES NO YES hsa-miR-449a YES YES YES hsa-miR-449b-5p YES YES YES hsa-miR-98-5p YES YES NO Display: