ctcRbase

Entry Detail

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General Information

Database ID: BRCA03402 Cancer Type: breast cancer Dataset: GSE111065 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: TRA2B Full Name: transformer 2 beta homolog Category: mRNA Synonyms: Htra2-beta|PPP1R156|SFRS10|SRFS10|TRA2-BETA|TRAN2B Chromosome: chr3 Strand: - Coordinate: Start Site(bp): 185915906 End Site(bp): 185938136 Gene Summary: This gene encodes a nuclear protein which functions as sequence-specific serine/arginine splicing factor which plays a role in mRNA processing, splicing patterns, and gene expression. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Aug 2011] External Links: Ensembl ID: ENSG00000136527 HGNC ID: HGNC:10781 Entrez Gene: 6434

Expression Profile of TRA2B Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-129-5p YES YES NO hsa-miR-1-3p YES YES YES hsa-miR-151a-3p YES NO YES hsa-miR-190a-5p YES YES NO hsa-miR-190b YES YES NO hsa-miR-199a-3p YES NO YES hsa-miR-199b-3p YES NO YES hsa-miR-206 YES YES YES hsa-miR-214-3p YES YES NO hsa-miR-224-5p YES YES YES hsa-miR-29a-3p YES YES NO hsa-miR-29b-3p YES YES NO hsa-miR-29c-3p YES YES NO hsa-miR-330-3p YES NO YES hsa-miR-335-5p YES YES NO hsa-miR-613 YES YES YES hsa-miR-9-5p YES YES NO Display: