Entry Detail



General Information

Database ID:BRCA03488
Cancer Type:breast cancer
Dataset:GSE111065
CTCs/CTM Isolation Method:microfluidics immunofluorescence



Gene Information

ncRNA Symbol:CSTB
Full Name:cystatin B
Category:mRNA
Synonyms:CPI-B|CST6|EPM1|EPM1A|PME|STFB|ULD
Chromosome:chr21
Strand:-
Coordinate:
Start Site(bp):43772511End Site(bp):43776445
Gene Summary:The cystatin superfamily encompasses proteins that contain multiple cystatin-like sequences. Some of the members are active cysteine protease inhibitors, while others have lost or perhaps never acquired this inhibitory activity. There are three inhibitory families in the superfamily, including the type 1 cystatins (stefins), type 2 cystatins and kininogens. This gene encodes a stefin that functions as an intracellular thiol protease inhibitor. The protein is able to form a dimer stabilized by noncovalent forces, inhibiting papain and cathepsins l, h and b. The protein is thought to play a role in protecting against the proteases leaking from lysosomes. Evidence indicates that mutations in this gene are responsible for the primary defects in patients with progressive myoclonic epilepsy (EPM1). One type of mutation responsible for EPM1 is the expansion in the promoter region of this gene of a CCCCGCCCCGCG repeat from 2-3 copies to 30-78 copies. [provided by RefSeq, Jul 2016]
External Links:
Ensembl ID:ENSG00000160213
HGNC ID:HGNC:2482
Entrez Gene:1476



Expression Profile of CSTB Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:
miRNA NamePITAmiRandaRNAhybrid
hsa-miR-143-3p
YES
YES
NO
hsa-miR-149-5p
YES
YES
NO
hsa-miR-21-5p
YES
YES
NO
hsa-miR-379-5p
YES
YES
NO
hsa-miR-488-3p
YES
YES
NO
hsa-miR-590-5p
YES
YES
NO
hsa-miR-7-5p
YES
YES
NO
hsa-miR-876-5p
YES
YES
NO
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