ctcRbase

Entry Detail

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General Information

Database ID: BRCA03499 Cancer Type: breast cancer Dataset: GSE111065 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: IST1 Full Name: IST1, ESCRT-III associated factor Category: mRNA Synonyms: OLC1 Chromosome: chr16 Strand: + Coordinate: Start Site(bp): 71845996 End Site(bp): 71931199 Gene Summary: This gene encodes a protein with MIT-interacting motifs that interacts with components of endosomal sorting complexes required for transport (ESCRT). ESCRT functions in vesicle budding, such as that which occurs during membrane abscission in cytokinesis. There is a pseudogene for this gene on chromosome 19. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Aug 2012] External Links: Ensembl ID: ENSG00000182149 HGNC ID: HGNC:28977 Entrez Gene: 9798

Expression Profile of IST1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-122-5p YES YES NO hsa-miR-124-3p YES NO YES hsa-miR-125a-5p YES YES YES hsa-miR-125b-5p YES YES YES hsa-miR-146a-5p YES YES YES hsa-miR-146b-5p YES YES YES hsa-miR-150-5p YES YES NO hsa-miR-15a-5p YES YES YES hsa-miR-15b-5p YES YES YES hsa-miR-16-5p YES YES YES hsa-miR-183-5p YES YES NO hsa-miR-194-5p YES YES NO hsa-miR-195-5p YES YES NO hsa-miR-197-3p YES YES NO hsa-miR-22-3p YES YES NO hsa-miR-320a YES YES NO hsa-miR-320b YES YES NO hsa-miR-320c YES YES NO hsa-miR-320d YES YES NO hsa-miR-342-3p YES YES NO hsa-miR-421 YES YES NO hsa-miR-424-5p YES YES YES hsa-miR-451a YES YES NO hsa-miR-486-5p YES YES NO hsa-miR-490-3p YES YES YES hsa-miR-491-5p YES YES NO hsa-miR-494-3p YES YES NO hsa-miR-497-5p YES YES YES hsa-miR-873-5p YES YES NO hsa-miR-874-3p YES YES YES hsa-miR-9-5p YES YES NO Display: