ctcRbase

Entry Detail

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General Information

Database ID: BRCA03554 Cancer Type: breast cancer Dataset: GSE111065 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: ARL6IP5 Full Name: ADP ribosylation factor like GTPase 6 interacting protein 5 Category: mRNA Synonyms: DERP11|GTRAP3-18|HSPC127|JWA|PRAF3|Yip6b|addicsin|hp22|jmx Chromosome: chr3 Strand: + Coordinate: Start Site(bp): 69084944 End Site(bp): 69106066 Gene Summary: Expression of this gene is affected by vitamin A. The encoded protein of this gene may be associated with the cytoskeleton. A similar protein in rats may play a role in the regulation of cell differentiation. The rat protein binds and inhibits the cell membrane glutamate transporter EAAC1. The expression of the rat gene is upregulated by retinoic acid, which results in a specific reduction in EAAC1-mediated glutamate transport. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000144746 HGNC ID: HGNC:16937 Entrez Gene: 10550

Expression Profile of ARL6IP5 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-129-5p YES YES NO hsa-miR-1297 YES YES NO hsa-miR-138-5p YES YES YES hsa-miR-145-5p YES YES NO hsa-miR-155-5p YES YES NO hsa-miR-15a-5p YES YES NO hsa-miR-15b-5p YES YES NO hsa-miR-16-5p YES YES NO hsa-miR-181a-5p YES YES NO hsa-miR-181b-5p YES YES NO hsa-miR-181c-5p YES YES NO hsa-miR-181d-5p YES YES NO hsa-miR-194-5p YES YES NO hsa-miR-195-5p YES YES NO hsa-miR-19a-3p YES YES NO hsa-miR-19b-3p YES YES NO hsa-miR-204-5p YES YES NO hsa-miR-211-5p YES YES NO hsa-miR-26a-5p YES YES NO hsa-miR-26b-5p YES YES NO hsa-miR-299-3p YES YES NO hsa-miR-340-5p YES YES NO hsa-miR-424-5p YES YES NO hsa-miR-494-3p YES YES NO hsa-miR-497-5p YES YES NO Display: