ctcRbase

Entry Detail

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General Information

Database ID: BRCA03636 Cancer Type: breast cancer Dataset: GSE55807 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: PDCD2 Full Name: programmed cell death 2 Category: mRNA Synonyms: RP8|ZMYND7 Chromosome: chr6 Strand: - Coordinate: Start Site(bp): 170575295 End Site(bp): 170584692 Gene Summary: This gene encodes a nuclear protein expressed in a variety of tissues. Expression of this gene has been shown to be repressed by B-cell CLL/lymphoma 6 (BCL6), a transcriptional repressor required for lymph node germinal center development, suggesting that BCL6 regulates apoptosis by its effects on this protein. Alternative splicing results in multiple transcript variants and pseudogenes have been identified on chromosomes 9 and 12. [provided by RefSeq, Dec 2010] External Links: Ensembl ID: ENSG00000071994 HGNC ID: HGNC:8762 Entrez Gene: 5134

Expression Profile of PDCD2 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-200b-3p YES YES NO hsa-miR-200c-3p YES YES NO hsa-miR-224-5p YES YES NO hsa-miR-23a-3p YES YES NO hsa-miR-23b-3p YES YES NO hsa-miR-339-5p YES YES NO hsa-miR-411-5p YES YES NO hsa-miR-429 YES YES NO hsa-miR-505-3p YES YES NO Display: