ctcRbase

Entry Detail

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General Information

Database ID: BRCA04021 Cancer Type: breast cancer Dataset: GSE55807 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: DDX1 Full Name: DEAD-box helicase 1 Category: mRNA Synonyms: DBP-RB|UKVH5d Chromosome: chr2 Strand: + Coordinate: Start Site(bp): 15591178 End Site(bp): 15631111 Gene Summary: DEAD box proteins, characterized by the conserved motif Asp-Glu-Ala-Asp (DEAD), are putative RNA helicases. They are implicated in a number of cellular processes involving alteration of RNA secondary structure such as translation initiation, nuclear and mitochondrial splicing, and ribosome and spliceosome assembly. Based on their distribution patterns, some members of this family are believed to be involved in embryogenesis, spermatogenesis, and cellular growth and division. This gene encodes a DEAD box protein of unknown function. It shows high transcription levels in 2 retinoblastoma cell lines and in tissues of neuroectodermal origin. [provided by RefSeq, Jul 2008] External Links: Ensembl ID: ENSG00000079785 HGNC ID: HGNC:2734 Entrez Gene: 1653

Expression Profile of DDX1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-129-5p YES YES NO hsa-miR-200b-3p YES YES NO hsa-miR-200c-3p YES YES NO hsa-miR-208a-3p YES YES NO hsa-miR-208b-3p YES YES NO hsa-miR-21-5p YES YES NO hsa-miR-335-5p YES YES NO hsa-miR-384 YES YES NO hsa-miR-429 YES YES NO hsa-miR-499a-5p YES YES NO hsa-miR-590-5p YES YES NO Display: