ctcRbase

Entry Detail

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General Information

Database ID: BRCA04232 Cancer Type: breast cancer Dataset: GSE109761 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: TM9SF2 Full Name: transmembrane 9 superfamily member 2 Category: mRNA Synonyms: P76 Chromosome: chr13 Strand: + Coordinate: Start Site(bp): 99501417 End Site(bp): 99564006 Gene Summary: This gene encodes a member of the transmembrane 9 superfamily. The encoded 76 kDa protein localizes to early endosomes in human cells. The encoded protein possesses a conserved and highly hydrophobic C-terminal domain which contains nine transmembrane domains. The protein may play a role in small molecule transport or act as an ion channel. A pseudogene associated with this gene is located on the X chromosome. [provided by RefSeq, Oct 2012] External Links: Ensembl ID: ENSG00000125304 HGNC ID: HGNC:11865 Entrez Gene: 9375

Expression Profile of TM9SF2 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-124-3p YES YES NO hsa-miR-146a-5p YES YES YES hsa-miR-146b-5p YES YES YES hsa-miR-300 YES YES NO hsa-miR-34a-5p YES YES NO hsa-miR-34c-5p YES YES NO hsa-miR-381-3p YES YES NO hsa-miR-449a YES YES NO hsa-miR-449b-5p YES YES NO hsa-miR-506-3p YES YES NO hsa-miR-625-5p YES NO NO hsa-miR-653-5p YES YES NO hsa-miR-7-5p YES YES NO Display: