ctcRbase

Entry Detail

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General Information

Database ID: BRCA04418 Cancer Type: breast cancer Dataset: GSE111065 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: PGAM1 Full Name: phosphoglycerate mutase 1 Category: mRNA Synonyms: HEL-S-35|PGAM-B|PGAMA Chromosome: chr10 Strand: + Coordinate: Start Site(bp): 97426160 End Site(bp): 97433441 Gene Summary: The protein encoded by this gene is a mutase that catalyzes the reversible reaction of 3-phosphoglycerate (3-PGA) to 2-phosphoglycerate (2-PGA) in the glycolytic pathway. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Nov 2015] External Links: Ensembl ID: ENSG00000171314 HGNC ID: HGNC:8888 Entrez Gene: 5223

Expression Profile of PGAM1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-135a-5p YES YES YES hsa-miR-135b-5p YES YES YES hsa-miR-1-3p YES NO YES hsa-miR-141-3p YES YES NO hsa-miR-190a-5p YES YES NO hsa-miR-190b YES YES NO hsa-miR-197-3p YES YES NO hsa-miR-200a-3p YES YES NO hsa-miR-206 YES NO YES hsa-miR-224-5p YES YES NO hsa-miR-25-3p NO YES YES hsa-miR-28-5p YES YES NO hsa-miR-299-3p YES YES NO hsa-miR-30a-5p YES YES NO hsa-miR-30b-5p YES YES NO hsa-miR-30c-5p YES YES NO hsa-miR-30d-5p YES YES NO hsa-miR-30e-5p YES YES NO hsa-miR-32-5p NO YES YES hsa-miR-326 YES YES NO hsa-miR-329-3p YES YES NO hsa-miR-330-5p YES YES NO hsa-miR-34a-5p YES YES NO hsa-miR-34c-5p YES YES NO hsa-miR-362-3p YES YES NO hsa-miR-363-3p NO YES YES hsa-miR-367-3p NO YES YES hsa-miR-449a YES YES NO hsa-miR-449b-5p YES YES NO hsa-miR-483-3p YES NO YES hsa-miR-582-5p YES NO YES hsa-miR-613 YES NO YES hsa-miR-708-5p YES YES NO hsa-miR-876-5p YES YES NO hsa-miR-92a-3p NO YES YES hsa-miR-92b-3p NO YES YES Display: