ctcRbase

Entry Detail

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General Information

Database ID: BRCA04633 Cancer Type: breast cancer Dataset: GSE41245 CTCs/CTM Isolation Method: CTC-Chip

Gene Information

ncRNA Symbol: NPAS3 Full Name: neuronal PAS domain protein 3 Category: mRNA Synonyms: MOP6|PASD6|bHLHe12 Chromosome: chr14 Strand: + Coordinate: Start Site(bp): 32934933 End Site(bp): 33804176 Gene Summary: This gene encodes a member of the basic helix-loop-helix and PAS domain-containing family of transcription factors. The encoded protein is localized to the nucleus and may regulate genes involved in neurogenesis. Chromosomal abnormalities that affect the coding potential of this gene are associated with schizophrenia and cognitive disability. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Sep 2009] External Links: Ensembl ID: ENSG00000151322 HGNC ID: HGNC:19311 Entrez Gene: 64067

Expression Profile of NPAS3 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-103a-3p NO YES YES hsa-miR-106a-5p YES YES YES hsa-miR-106b-5p YES YES YES hsa-miR-107 NO YES YES hsa-miR-10a-5p NO YES YES hsa-miR-10b-5p NO YES YES hsa-miR-128-3p NO YES YES hsa-miR-141-3p NO YES YES hsa-miR-153-3p YES YES NO hsa-miR-15a-5p NO YES YES hsa-miR-15b-5p NO YES YES hsa-miR-16-5p NO YES YES hsa-miR-17-5p YES YES YES hsa-miR-186-5p YES YES NO hsa-miR-195-5p NO YES YES hsa-miR-19a-3p YES YES YES hsa-miR-19b-3p YES YES YES hsa-miR-200a-3p NO YES YES hsa-miR-20a-5p YES YES YES hsa-miR-20b-5p YES YES YES hsa-miR-21-5p NO YES YES hsa-miR-25-3p NO YES YES hsa-miR-29a-3p NO YES YES hsa-miR-29b-3p NO YES YES hsa-miR-29c-3p NO YES YES hsa-miR-302a-3p YES YES YES hsa-miR-302b-3p YES YES YES hsa-miR-302c-3p YES YES YES hsa-miR-302d-3p YES YES YES hsa-miR-302e YES YES YES hsa-miR-32-5p NO YES YES hsa-miR-363-3p NO YES YES hsa-miR-367-3p NO YES YES hsa-miR-372-3p YES YES YES hsa-miR-373-3p YES YES YES hsa-miR-377-3p NO YES YES hsa-miR-424-5p NO YES YES hsa-miR-448 YES YES NO hsa-miR-451a YES YES NO hsa-miR-455-5p YES YES YES hsa-miR-497-5p NO YES YES hsa-miR-519d-3p YES YES YES hsa-miR-520a-3p YES YES YES hsa-miR-520b YES YES YES hsa-miR-520c-3p YES YES YES hsa-miR-520d-3p YES YES YES hsa-miR-520e YES YES YES hsa-miR-543 YES YES YES hsa-miR-590-5p NO YES YES hsa-miR-92a-3p NO YES YES hsa-miR-92b-3p NO YES YES hsa-miR-93-5p YES YES YES Display: