ctcRbase

Entry Detail

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General Information

Database ID: BRCA04655 Cancer Type: breast cancer Dataset: GSE55807 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: VPS25 Full Name: vacuolar protein sorting 25 homolog Category: mRNA Synonyms: DERP9|EAP20|FAP20 Chromosome: chr17 Strand: + Coordinate: Start Site(bp): 42773436 End Site(bp): 42779599 Gene Summary: This gene encodes a protein that is a subunit of the endosomal sorting complex required for transport II (ESCRT-II). This protein complex functions in sorting of ubiquitinated membrane proteins during endocytosis. A pseudogene of this gene is present on chromosome 1. [provided by RefSeq, Jul 2013] External Links: Ensembl ID: ENSG00000131475 HGNC ID: HGNC:28122 Entrez Gene: 84313

Expression Profile of VPS25 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-let-7a-5p YES YES NO hsa-let-7b-5p YES YES NO hsa-let-7c-5p YES YES NO hsa-let-7d-5p YES YES NO hsa-let-7e-5p YES YES NO hsa-let-7f-5p YES YES NO hsa-let-7g-5p YES YES NO hsa-let-7i-5p YES YES NO hsa-miR-149-5p YES YES NO hsa-miR-29a-3p YES NO YES hsa-miR-29b-3p YES NO YES hsa-miR-29c-3p YES NO YES hsa-miR-340-5p YES YES NO hsa-miR-98-5p YES YES NO Display: