ctcRbase

Entry Detail

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General Information

Database ID: BRCA04821 Cancer Type: breast cancer Dataset: GSE111065 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: WASF2 Full Name: WAS protein family member 2 Category: mRNA Synonyms: IMD2|SCAR2|WASF4|WAVE2|dJ393P12.2 Chromosome: chr1 Strand: - Coordinate: Start Site(bp): 27404226 End Site(bp): 27490158 Gene Summary: This gene encodes a member of the Wiskott-Aldrich syndrome protein family. The gene product is a protein that forms a multiprotein complex that links receptor kinases and actin. Binding to actin occurs through a C-terminal verprolin homology domain in all family members. The multiprotein complex serves to tranduce signals that involve changes in cell shape, motility or function. The published map location (PMID:10381382) has been changed based on recent genomic sequence comparisons, which indicate that the expressed gene is located on chromosome 1, and a pseudogene may be located on chromosome X. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jan 2011] External Links: Ensembl ID: ENSG00000158195 HGNC ID: HGNC:12733 Entrez Gene: 10163

Expression Profile of WASF2 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-106a-5p YES YES NO hsa-miR-106b-5p YES YES NO hsa-miR-1271-5p YES NO YES hsa-miR-129-2-3p YES NO YES hsa-miR-1321 YES NO NO hsa-miR-133a-3p YES NO YES hsa-miR-133b YES NO YES hsa-miR-138-5p YES YES NO hsa-miR-146a-5p YES NO YES hsa-miR-146b-5p YES NO YES hsa-miR-153-3p YES YES YES hsa-miR-17-5p YES YES NO hsa-miR-182-5p YES YES YES hsa-miR-185-5p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-18a-5p YES YES NO hsa-miR-18b-5p YES YES NO hsa-miR-204-5p YES YES NO hsa-miR-20a-5p YES YES NO hsa-miR-20b-5p YES YES NO hsa-miR-211-5p YES YES NO hsa-miR-221-3p YES NO YES hsa-miR-222-3p YES NO YES hsa-miR-22-3p YES YES NO hsa-miR-224-5p YES YES NO hsa-miR-29a-3p YES NO YES hsa-miR-29b-3p YES NO YES hsa-miR-29c-3p YES NO YES hsa-miR-326 YES YES NO hsa-miR-328-3p YES NO YES hsa-miR-330-5p YES YES NO hsa-miR-421 NO YES YES hsa-miR-448 YES YES NO hsa-miR-519d-3p YES YES NO hsa-miR-542-3p YES YES NO hsa-miR-760 YES NO YES hsa-miR-873-5p YES YES NO hsa-miR-876-5p YES YES NO hsa-miR-93-5p YES YES NO hsa-miR-9-5p YES YES YES hsa-miR-96-5p YES NO YES Display: