ctcRbase

Entry Detail

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General Information

Database ID: BRCA04910 Cancer Type: breast cancer Dataset: GSE55807 CTCs/CTM Isolation Method: CTC-iChip

Gene Information

ncRNA Symbol: SSR1 Full Name: signal sequence receptor subunit 1 Category: mRNA Synonyms: TRAPA Chromosome: chr6 Strand: - Coordinate: Start Site(bp): 7268306 End Site(bp): 7347446 Gene Summary: The signal sequence receptor (SSR) is a glycosylated endoplasmic reticulum (ER) membrane receptor associated with protein translocation across the ER membrane. The SSR consists of 2 subunits, a 34-kD glycoprotein encoded by this gene and a 22-kD glycoprotein. This gene generates several mRNA species as a result of complex alternative polyadenylation. This gene is unusual in that it utilizes arrays of polyA signal sequences that are mostly non-canonical. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, May 2014] External Links: Ensembl ID: ENSG00000124783 HGNC ID: HGNC:11323 Entrez Gene: 6745

Expression Profile of SSR1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1323 YES NO NO hsa-miR-135a-5p YES NO YES hsa-miR-135b-5p YES NO YES hsa-miR-137 YES NO YES hsa-miR-148a-3p YES NO YES hsa-miR-148b-3p YES NO YES hsa-miR-152-3p YES NO YES hsa-miR-15a-5p YES NO YES hsa-miR-15b-5p YES NO YES hsa-miR-16-5p YES NO YES hsa-miR-195-5p YES NO YES hsa-miR-196a-5p YES NO YES hsa-miR-196b-5p YES NO YES hsa-miR-218-5p YES NO YES hsa-miR-219a-2-3p YES NO YES hsa-miR-24-3p YES NO YES hsa-miR-299-5p YES NO YES hsa-miR-362-3p YES NO YES hsa-miR-424-5p YES NO YES hsa-miR-455-3p YES NO YES hsa-miR-495-3p YES NO YES hsa-miR-497-5p YES NO YES hsa-miR-548o-3p YES NO NO Display: