ctcRbase

Entry Detail

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General Information

Database ID: BRCA05102 Cancer Type: breast cancer Dataset: GSE109761 CTCs/CTM Isolation Method: microfluidics immunofluorescence

Gene Information

ncRNA Symbol: SLC39A1 Full Name: solute carrier family 39 member 1 Category: mRNA Synonyms: ZIP1|ZIRTL Chromosome: chr1 Strand: - Coordinate: Start Site(bp): 153959099 End Site(bp): 153968184 Gene Summary: This gene encodes a member of the zinc-iron permease family. The encoded protein is localized to the cell membrane and acts as a zinc uptake transporter. This gene has been linked to prostate cancer, breast cancer, and Alzheimer's disease. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2012] External Links: Ensembl ID: ENSG00000143570 HGNC ID: HGNC:12876 Entrez Gene: 27173

Expression Profile of SLC39A1 Gene

 

Regulatory Relationship

mRNA targets: NA miRNA targets: miRNA Name PITA miRanda RNAhybrid hsa-miR-1271-5p YES YES YES hsa-miR-133a-3p YES YES YES hsa-miR-133b YES YES YES hsa-miR-146a-5p YES YES YES hsa-miR-146b-5p YES YES YES hsa-miR-148a-3p YES YES NO hsa-miR-15a-5p YES YES NO hsa-miR-15b-5p YES YES NO hsa-miR-16-5p YES YES NO hsa-miR-182-5p YES YES YES hsa-miR-185-5p YES YES NO hsa-miR-186-5p YES YES NO hsa-miR-190a-5p YES YES NO hsa-miR-190b YES YES NO hsa-miR-194-5p YES YES NO hsa-miR-195-5p YES YES NO hsa-miR-214-3p YES NO NO hsa-miR-218-5p YES YES YES hsa-miR-223-3p YES YES YES hsa-miR-24-3p YES YES NO hsa-miR-346 YES YES NO hsa-miR-384 YES YES NO hsa-miR-424-5p YES YES NO hsa-miR-494-3p YES YES YES hsa-miR-497-5p YES YES NO hsa-miR-96-5p YES YES YES Display: