Entry Detail



General Information

Database ID:BRCA05114
Cancer Type:breast cancer
Dataset:GSE111065
CTCs/CTM Isolation Method:microfluidics immunofluorescence



Gene Information

ncRNA Symbol:DDX39B
Full Name:DExD-box helicase 39B
Category:mRNA
Synonyms:BAT1|D6S81E|UAP56
Chromosome:chr6
Strand:-
Coordinate:
Start Site(bp):31530219End Site(bp):31542448
Gene Summary:This gene encodes a member of the DEAD box family of RNA-dependent ATPases that mediate ATP hydrolysis during pre-mRNA splicing. The encoded protein is an essential splicing factor required for association of U2 small nuclear ribonucleoprotein with pre-mRNA, and it also plays an important role in mRNA export from the nucleus to the cytoplasm. This gene belongs to a cluster of genes localized in the vicinity of the genes encoding tumor necrosis factor alpha and tumor necrosis factor beta. These genes are all within the human major histocompatibility complex class III region. Mutations in this gene may be associated with rheumatoid arthritis. Alternative splicing results in multiple transcript variants. Related pseudogenes have been identified on both chromosomes 6 and 11. Read-through transcription also occurs between this gene and the upstream ATP6V1G2 (ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G2) gene. [provided by RefSeq, Feb 2011]
External Links:
Ensembl ID:ENSG00000198563
HGNC ID:HGNC:13917
Entrez Gene:7919



Expression Profile of DDX39B Gene

 







Regulatory Relationship

mRNA targets:NA
miRNA targets:NA
Display:N/A